Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Rfx3P48381 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.34□□□□□ -0.59
Rfx3P48381 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Gm13123-201ENSMUST00000122173 492 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.34□□□□□ -0.59
Rfx3P48381 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.34□□□□□ -0.59
Rfx3P48381 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.34□□□□□ -0.59
Rfx3P48381 Gm8810-201ENSMUST00000172895 754 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Gm27486-201ENSMUST00000184923 80 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rfx3P48381 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfx3P48381 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfx3P48381 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.34□□□□□ -0.59
Rfx3P48381 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rfx3P48381 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Rfx3P48381 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.33□□□□□ -0.6
Rfx3P48381 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Gm11814-201ENSMUST00000119515 929 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Gm11803-201ENSMUST00000119966 444 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Gm13813-201ENSMUST00000120998 787 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Gm12291-201ENSMUST00000121627 311 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Gm2231-201ENSMUST00000125661 612 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Gm10012-201ENSMUST00000078252 192 ntBASIC11.33□□□□□ -0.6
Rfx3P48381 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfx3P48381 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rfx3P48381 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfx3P48381 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.32□□□□□ -0.6
Rfx3P48381 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfx3P48381 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms