Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Vps4bP46467 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.73□□□□□ -0.37
Vps4bP46467 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Vps4bP46467 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps4bP46467 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps4bP46467 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps4bP46467 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.73□□□□□ -0.37
Vps4bP46467 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Vps4bP46467 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps4bP46467 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.73□□□□□ -0.37
Vps4bP46467 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps4bP46467 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps4bP46467 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm19163-201ENSMUST00000223313 780 ntBASIC12.73□□□□□ -0.37
Vps4bP46467 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Gm10478-201ENSMUST00000084451 396 ntBASIC12.73□□□□□ -0.37
Vps4bP46467 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vps4bP46467 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps4bP46467 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps4bP46467 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps4bP46467 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Snord83b-201ENSMUST00000104546 94 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps4bP46467 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm12390-201ENSMUST00000117897 397 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Gm14760-201ENSMUST00000121831 999 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm22331-201ENSMUST00000158066 136 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm16296-201ENSMUST00000159905 325 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm8652-201ENSMUST00000181363 964 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps4bP46467 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps4bP46467 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps4bP46467 Gm24526-201ENSMUST00000082921 158 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Olfr582-201ENSMUST00000098212 960 ntBASIC12.72□□□□□ -0.37
Vps4bP46467 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps4bP46467 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps4bP46467 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps4bP46467 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms