Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Cd27P41272 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.07□□□□□ -0.8
Cd27P41272 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Gm27243-201ENSMUST00000183964 521 ntBASIC10.07□□□□□ -0.8
Cd27P41272 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.07□□□□□ -0.8
Cd27P41272 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.07□□□□□ -0.8
Cd27P41272 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.07□□□□□ -0.8
Cd27P41272 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.07□□□□□ -0.8
Cd27P41272 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.07□□□□□ -0.8
Cd27P41272 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.07□□□□□ -0.8
Cd27P41272 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cd27P41272 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.07□□□□□ -0.8
Cd27P41272 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.07□□□□□ -0.8
Cd27P41272 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cd27P41272 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cd27P41272 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.07□□□□□ -0.8
Cd27P41272 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Gm15370-201ENSMUST00000117158 253 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm11531-201ENSMUST00000117614 555 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Gm12314-201ENSMUST00000118104 538 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm4986-201ENSMUST00000119731 549 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm13297-201ENSMUST00000120205 934 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Cd27P41272 Gm2546-201ENSMUST00000182630 991 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Gm42627-201ENSMUST00000197347 224 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm6334-201ENSMUST00000207083 228 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm5950-201ENSMUST00000213337 772 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.06□□□□□ -0.8
Cd27P41272 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Gm9257-201ENSMUST00000221254 232 ntBASIC10.06□□□□□ -0.8
Cd27P41272 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Morn2-202ENSMUST00000227729 656 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cd27P41272 Olfr582-201ENSMUST00000098212 960 ntBASIC10.06□□□□□ -0.8
Cd27P41272 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cd27P41272 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cd27P41272 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cd27P41272 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms