Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox6P40645 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sox6P40645 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox6P40645 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox6P40645 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
Sox6P40645 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Gm4984-201ENSMUST00000115987 360 ntBASIC11.79□□□□□ -0.52
Sox6P40645 Gm14350-201ENSMUST00000116642 640 ntBASIC11.79□□□□□ -0.52
Sox6P40645 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox6P40645 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox6P40645 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.79□□□□□ -0.52
Sox6P40645 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.79□□□□□ -0.52
Sox6P40645 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Daam2-202ENSMUST00000224595 1926 ntBASIC11.79□□□□□ -0.52
Sox6P40645 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sox6P40645 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Sox6P40645 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox6P40645 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox6P40645 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox6P40645 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.78□□□□□ -0.52
Sox6P40645 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox6P40645 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.78□□□□□ -0.52
Sox6P40645 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox6P40645 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox6P40645 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox6P40645 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox6P40645 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.78□□□□□ -0.52
Sox6P40645 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.78□□□□□ -0.52
Sox6P40645 Gm44069-201ENSMUST00000204898 506 ntBASIC11.78□□□□□ -0.52
Sox6P40645 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox6P40645 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox6P40645 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms