Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm11801-201ENSMUST00000117807 746 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cxcl12P40224 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm9022-201ENSMUST00000182482 992 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm27530-201ENSMUST00000184096 98 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.86□□□□□ -0.35
Cxcl12P40224 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cxcl12P40224 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.86□□□□□ -0.35
Cxcl12P40224 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.85□□□□□ -0.35
Cxcl12P40224 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Gm11509-201ENSMUST00000117358 325 ntBASIC12.85□□□□□ -0.35
Cxcl12P40224 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.85□□□□□ -0.35
Cxcl12P40224 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.85□□□□□ -0.35
Cxcl12P40224 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.85□□□□□ -0.35
Cxcl12P40224 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.85□□□□□ -0.35
Cxcl12P40224 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.85□□□□□ -0.35
Cxcl12P40224 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cxcl12P40224 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cxcl12P40224 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Gm11663-201ENSMUST00000117888 290 ntBASIC12.84□□□□□ -0.35
Cxcl12P40224 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.84□□□□□ -0.35
Cxcl12P40224 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cxcl12P40224 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms