Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.96□□□□□ -0.17
Gjb1P28230 Gm20392-201ENSMUST00000173047 701 ntBASIC13.96□□□□□ -0.17
Gjb1P28230 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gjb1P28230 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gjb1P28230 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.96□□□□□ -0.17
Gjb1P28230 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.96□□□□□ -0.17
Gjb1P28230 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.96□□□□□ -0.17
Gjb1P28230 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Gjb1P28230 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gjb1P28230 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gjb1P28230 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.96□□□□□ -0.18
Gjb1P28230 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Gjb1P28230 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Gjb1P28230 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Gjb1P28230 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Gjb1P28230 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Gjb1P28230 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.95□□□□□ -0.18
Gjb1P28230 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.95□□□□□ -0.18
Gjb1P28230 Gm12314-201ENSMUST00000118104 538 ntBASIC13.95□□□□□ -0.18
Gjb1P28230 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.95□□□□□ -0.18
Gjb1P28230 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.95□□□□□ -0.18
Gjb1P28230 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.95□□□□□ -0.18
Gjb1P28230 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Gm7902-201ENSMUST00000198842 947 ntBASIC13.95□□□□□ -0.18
Gjb1P28230 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.95□□□□□ -0.18
Gjb1P28230 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.95□□□□□ -0.18
Gjb1P28230 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.95□□□□□ -0.18
Gjb1P28230 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.95□□□□□ -0.18
Gjb1P28230 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Gjb1P28230 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Gjb1P28230 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gjb1P28230 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.94□□□□□ -0.18
Gjb1P28230 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gjb1P28230 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Mir874-201ENSMUST00000104769 76 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gjb1P28230 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Gm11989-201ENSMUST00000117240 672 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Gm11362-201ENSMUST00000118838 850 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Gm13182-201ENSMUST00000122241 312 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.94□□□□□ -0.18
Gjb1P28230 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.94□□□□□ -0.18
Gjb1P28230 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Gm8325-201ENSMUST00000099086 453 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gjb1P28230 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.94□□□□□ -0.18
Gjb1P28230 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gjb1P28230 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gjb1P28230 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms