Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.84□□□□□ -0.51
TP20293 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.84□□□□□ -0.51
TP20293 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.84□□□□□ -0.51
TP20293 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Snora73a-201ENSMUST00000082453 205 ntBASIC11.84□□□□□ -0.51
TP20293 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.84□□□□□ -0.51
TP20293 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TP20293 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TP20293 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
TP20293 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TP20293 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TP20293 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
TP20293 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.83□□□□□ -0.52
TP20293 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TP20293 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TP20293 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.83□□□□□ -0.52
TP20293 Gm13813-201ENSMUST00000120998 787 ntBASIC11.83□□□□□ -0.52
TP20293 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.83□□□□□ -0.52
TP20293 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Gm32025-201ENSMUST00000217960 307 ntBASIC11.83□□□□□ -0.52
TP20293 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TP20293 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.83□□□□□ -0.52
TP20293 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.83□□□□□ -0.52
TP20293 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.83□□□□□ -0.52
TP20293 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TP20293 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TP20293 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.82□□□□□ -0.52
TP20293 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
TP20293 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
TP20293 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
TP20293 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TP20293 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.82□□□□□ -0.52
TP20293 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TP20293 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.82□□□□□ -0.52
TP20293 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.82□□□□□ -0.52
TP20293 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.82□□□□□ -0.52
TP20293 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.82□□□□□ -0.52
TP20293 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Gm27514-201ENSMUST00000183692 110 ntBASIC11.82□□□□□ -0.52
TP20293 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TP20293 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.82□□□□□ -0.52
TP20293 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.82□□□□□ -0.52
TP20293 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.82□□□□□ -0.52
TP20293 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
TP20293 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TP20293 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
TP20293 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms