Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.7□□□□□ -0.38
VimP20152 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
VimP20152 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Gm43125-201ENSMUST00000201724 730 ntBASIC12.7□□□□□ -0.38
VimP20152 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VimP20152 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.7□□□□□ -0.38
VimP20152 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.69□□□□□ -0.38
VimP20152 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Gm12485-201ENSMUST00000119641 291 ntBASIC12.69□□□□□ -0.38
VimP20152 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.69□□□□□ -0.38
VimP20152 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.69□□□□□ -0.38
VimP20152 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Gm27494-201ENSMUST00000184735 189 ntBASIC12.69□□□□□ -0.38
VimP20152 Gm28630-201ENSMUST00000187806 498 ntBASIC12.69□□□□□ -0.38
VimP20152 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.69□□□□□ -0.38
VimP20152 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VimP20152 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VimP20152 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VimP20152 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.68□□□□□ -0.38
VimP20152 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.68□□□□□ -0.38
VimP20152 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VimP20152 Mir686-201ENSMUST00000102174 109 ntBASIC12.68□□□□□ -0.38
VimP20152 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Gm8410-201ENSMUST00000117225 605 ntBASIC12.68□□□□□ -0.38
VimP20152 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VimP20152 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.68□□□□□ -0.38
VimP20152 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.68□□□□□ -0.38
VimP20152 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.68□□□□□ -0.38
VimP20152 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VimP20152 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.68□□□□□ -0.38
VimP20152 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VimP20152 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
VimP20152 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VimP20152 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms