Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.3□□□□□ -0.28
TnfP06804 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.3□□□□□ -0.28
TnfP06804 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TnfP06804 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.29□□□□□ -0.28
TnfP06804 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TnfP06804 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.29□□□□□ -0.28
TnfP06804 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.29□□□□□ -0.28
TnfP06804 Gm13296-201ENSMUST00000117854 997 ntBASIC13.29□□□□□ -0.28
TnfP06804 Gm9083-201ENSMUST00000120423 819 ntBASIC13.29□□□□□ -0.28
TnfP06804 Gm24990-201ENSMUST00000157406 323 ntBASIC13.29□□□□□ -0.28
TnfP06804 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TnfP06804 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Gm44958-201ENSMUST00000203734 736 ntBASIC13.29□□□□□ -0.28
TnfP06804 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Gm45224-201ENSMUST00000208203 414 ntBASIC13.29□□□□□ -0.28
TnfP06804 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.29□□□□□ -0.28
TnfP06804 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Gm26035-201ENSMUST00000083065 308 ntBASIC13.29□□□□□ -0.28
TnfP06804 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TnfP06804 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TnfP06804 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.29□□□□□ -0.28
TnfP06804 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.29□□□□□ -0.28
TnfP06804 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TnfP06804 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TnfP06804 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Gm14760-201ENSMUST00000121831 999 ntBASIC13.28□□□□□ -0.28
TnfP06804 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Gm16505-201ENSMUST00000179981 232 ntBASIC13.28□□□□□ -0.28
TnfP06804 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.28□□□□□ -0.28
TnfP06804 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.28□□□□□ -0.28
TnfP06804 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.28□□□□□ -0.28
TnfP06804 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.28□□□□□ -0.28
TnfP06804 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TnfP06804 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TnfP06804 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TnfP06804 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TnfP06804 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TnfP06804 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.27□□□□□ -0.28
TnfP06804 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.27□□□□□ -0.29
TnfP06804 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms