Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm44405-201ENSMUST00000198952 126 ntBASIC11.19□□□□□ -0.62
P06344 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.19□□□□□ -0.62
P06344 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
P06344 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.19□□□□□ -0.62
P06344 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.19□□□□□ -0.62
P06344 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.19□□□□□ -0.62
P06344 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P06344 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.19□□□□□ -0.62
P06344 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P06344 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06344 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.19□□□□□ -0.62
P06344 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P06344 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P06344 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.18□□□□□ -0.62
P06344 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.18□□□□□ -0.62
P06344 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.18□□□□□ -0.62
P06344 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Gm24255-201ENSMUST00000104481 128 ntBASIC11.18□□□□□ -0.62
P06344 Gm25214-201ENSMUST00000104573 129 ntBASIC11.18□□□□□ -0.62
P06344 Gm11531-201ENSMUST00000117614 555 ntBASIC11.18□□□□□ -0.62
P06344 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
P06344 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.18□□□□□ -0.62
P06344 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Gm30285-201ENSMUST00000214614 422 ntBASIC11.18□□□□□ -0.62
P06344 Gm9257-201ENSMUST00000221254 232 ntBASIC11.18□□□□□ -0.62
P06344 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.18□□□□□ -0.62
P06344 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.18□□□□□ -0.62
P06344 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P06344 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
P06344 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.18□□□□□ -0.62
P06344 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06344 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.17□□□□□ -0.62
P06344 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.17□□□□□ -0.62
P06344 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
P06344 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.17□□□□□ -0.62
P06344 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
P06344 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
P06344 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.17□□□□□ -0.62
P06344 Gm12058-201ENSMUST00000118614 437 ntBASIC11.17□□□□□ -0.62
P06344 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.17□□□□□ -0.62
P06344 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.17□□□□□ -0.62
P06344 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
P06344 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.17□□□□□ -0.62
P06344 Gm26956-201ENSMUST00000182176 986 ntBASIC11.17□□□□□ -0.62
P06344 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.17□□□□□ -0.62
P06344 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.17□□□□□ -0.62
P06344 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06344 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.17□□□□□ -0.62
P06344 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms