Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Mir874-201ENSMUST00000104769 76 ntBASIC10.53□□□□□ -0.72
Hoxa3P02831 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Hoxa3P02831 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.53□□□□□ -0.72
Hoxa3P02831 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.53□□□□□ -0.72
Hoxa3P02831 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.53□□□□□ -0.72
Hoxa3P02831 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hoxa3P02831 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hoxa3P02831 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.52□□□□□ -0.72
Hoxa3P02831 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.52□□□□□ -0.72
Hoxa3P02831 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa3P02831 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa3P02831 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa3P02831 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.52□□□□□ -0.72
Hoxa3P02831 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Hoxa3P02831 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa3P02831 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Hoxa3P02831 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hoxa3P02831 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm15808-201ENSMUST00000119046 604 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm12291-201ENSMUST00000121627 311 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Hoxa3P02831 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm18056-201ENSMUST00000207670 568 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm18061-201ENSMUST00000208350 562 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm18063-201ENSMUST00000208529 568 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm18052-201ENSMUST00000208750 559 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Hoxa3P02831 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Daam2-202ENSMUST00000224595 1926 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.52□□□□□ -0.73
Hoxa3P02831 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hoxa3P02831 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms