Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm22018-201ENSMUST00000104357 131 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm15824-201ENSMUST00000119516 955 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm9083-201ENSMUST00000120423 819 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm18187-201ENSMUST00000196476 984 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm44882-201ENSMUST00000205702 802 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm6007-201ENSMUST00000208170 823 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm39404-201ENSMUST00000216350 313 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igh-VJ558P01758 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm11425-201ENSMUST00000119608 498 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Mir1982-201ENSMUST00000157368 74 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igh-VJ558P01758 Gm9396-201ENSMUST00000076703 567 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms