Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CopeO89079 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.91□□□□□ -0.34
CopeO89079 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.91□□□□□ -0.34
CopeO89079 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.91□□□□□ -0.34
CopeO89079 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.91□□□□□ -0.34
CopeO89079 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.91□□□□□ -0.34
CopeO89079 Gm38671-201ENSMUST00000200573 130 ntBASIC12.91□□□□□ -0.34
CopeO89079 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.91□□□□□ -0.34
CopeO89079 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.91□□□□□ -0.34
CopeO89079 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.91□□□□□ -0.34
CopeO89079 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
CopeO89079 Map1b-203ENSMUST00000223725 2669 ntBASIC12.91□□□□□ -0.34
CopeO89079 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CopeO89079 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopeO89079 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.9□□□□□ -0.34
CopeO89079 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CopeO89079 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CopeO89079 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Gm15703-201ENSMUST00000120250 880 ntBASIC12.9□□□□□ -0.34
CopeO89079 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.9□□□□□ -0.34
CopeO89079 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Gm22121-201ENSMUST00000175148 54 ntBASIC12.9□□□□□ -0.34
CopeO89079 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Gm42599-201ENSMUST00000201308 469 ntBASIC12.9□□□□□ -0.34
CopeO89079 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.9□□□□□ -0.34
CopeO89079 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.9□□□□□ -0.34
CopeO89079 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.9□□□□□ -0.34
CopeO89079 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CopeO89079 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopeO89079 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.9□□□□□ -0.35
CopeO89079 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CopeO89079 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CopeO89079 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CopeO89079 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.89□□□□□ -0.35
CopeO89079 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CopeO89079 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.89□□□□□ -0.35
CopeO89079 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.89□□□□□ -0.35
CopeO89079 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopeO89079 Gm26185-201ENSMUST00000157692 266 ntBASIC12.89□□□□□ -0.35
CopeO89079 Gm17208-201ENSMUST00000168388 535 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms