Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.33□□□□□ -0.44
ClppO88696 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ClppO88696 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.32□□□□□ -0.44
ClppO88696 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ClppO88696 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
ClppO88696 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.32□□□□□ -0.44
ClppO88696 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.32□□□□□ -0.44
ClppO88696 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Gm27320-201ENSMUST00000184892 109 ntBASIC12.32□□□□□ -0.44
ClppO88696 Gm38158-201ENSMUST00000194617 339 ntBASIC12.32□□□□□ -0.44
ClppO88696 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.32□□□□□ -0.44
ClppO88696 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.32□□□□□ -0.44
ClppO88696 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.32□□□□□ -0.44
ClppO88696 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ClppO88696 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ClppO88696 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ClppO88696 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.32□□□□□ -0.44
ClppO88696 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.32□□□□□ -0.44
ClppO88696 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClppO88696 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
ClppO88696 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Gm11964-201ENSMUST00000120982 444 ntBASIC12.31□□□□□ -0.44
ClppO88696 Gm14381-201ENSMUST00000122105 414 ntBASIC12.31□□□□□ -0.44
ClppO88696 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.31□□□□□ -0.44
ClppO88696 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Gm17208-201ENSMUST00000168388 535 ntBASIC12.31□□□□□ -0.44
ClppO88696 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.31□□□□□ -0.44
ClppO88696 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.31□□□□□ -0.44
ClppO88696 Gm10608-202ENSMUST00000213924 676 ntBASIC12.31□□□□□ -0.44
ClppO88696 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
ClppO88696 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ClppO88696 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.31□□□□□ -0.44
ClppO88696 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms