Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarce1O54941 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.89□□□□□ -0.03
Smarce1O54941 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarce1O54941 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarce1O54941 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarce1O54941 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.89□□□□□ -0.03
Smarce1O54941 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.89□□□□□ -0.03
Smarce1O54941 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.89□□□□□ -0.03
Smarce1O54941 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Gm24196-201ENSMUST00000179161 110 ntBASIC14.89□□□□□ -0.03
Smarce1O54941 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Gm6180-201ENSMUST00000065243 498 ntBASIC14.89□□□□□ -0.03
Smarce1O54941 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarce1O54941 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.89□□□□□ -0.03
Smarce1O54941 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Smarce1O54941 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarce1O54941 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarce1O54941 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarce1O54941 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.88□□□□□ -0.03
Smarce1O54941 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Smarce1O54941 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarce1O54941 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarce1O54941 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Gm23984-201ENSMUST00000157139 203 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 Rmrp-201ENSMUST00000157463 271 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.88□□□□□ -0.03
Smarce1O54941 Gm6244-201ENSMUST00000178732 841 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 Gm42599-201ENSMUST00000201308 469 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 Gm19163-201ENSMUST00000223313 780 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Gm10012-201ENSMUST00000078252 192 ntBASIC14.88□□□□□ -0.03
Smarce1O54941 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Smarce1O54941 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarce1O54941 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarce1O54941 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarce1O54941 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarce1O54941 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarce1O54941 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarce1O54941 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.87□□□□□ -0.03
Smarce1O54941 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.87□□□□□ -0.03
Smarce1O54941 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarce1O54941 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarce1O54941 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.87□□□□□ -0.03
Smarce1O54941 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Smarce1O54941 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarce1O54941 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarce1O54941 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms