Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.74□□□□□ -0.37
Limk2O54785 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.74□□□□□ -0.37
Limk2O54785 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Gm3786-201ENSMUST00000202659 378 ntBASIC12.74□□□□□ -0.37
Limk2O54785 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.74□□□□□ -0.37
Limk2O54785 Gm45925-201ENSMUST00000218882 744 ntBASIC12.74□□□□□ -0.37
Limk2O54785 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.74□□□□□ -0.37
Limk2O54785 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Limk2O54785 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.73□□□□□ -0.37
Limk2O54785 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Limk2O54785 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Limk2O54785 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Limk2O54785 Gm44405-201ENSMUST00000198952 126 ntBASIC12.73□□□□□ -0.37
Limk2O54785 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.73□□□□□ -0.37
Limk2O54785 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Limk2O54785 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.73□□□□□ -0.37
Limk2O54785 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.73□□□□□ -0.37
Limk2O54785 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.73□□□□□ -0.37
Limk2O54785 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Limk2O54785 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.73□□□□□ -0.37
Limk2O54785 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Limk2O54785 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Limk2O54785 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.72□□□□□ -0.37
Limk2O54785 Gm13736-201ENSMUST00000119272 253 ntBASIC12.72□□□□□ -0.37
Limk2O54785 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Gm9630-201ENSMUST00000178304 885 ntBASIC12.72□□□□□ -0.37
Limk2O54785 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Limk2O54785 Rps4l-202ENSMUST00000204242 789 ntBASIC12.72□□□□□ -0.37
Limk2O54785 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.72□□□□□ -0.37
Limk2O54785 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Limk2O54785 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.72□□□□□ -0.37
Limk2O54785 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Limk2O54785 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Limk2O54785 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Limk2O54785 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Limk2O54785 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Limk2O54785 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms