Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm18052-201ENSMUST00000208750 559 ntBASIC13.57□□□□□ -0.24
Per1O35973 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.57□□□□□ -0.24
Per1O35973 Gm45598-202ENSMUST00000210719 986 ntBASIC13.57□□□□□ -0.24
Per1O35973 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.57□□□□□ -0.24
Per1O35973 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Per1O35973 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.57□□□□□ -0.24
Per1O35973 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Per1O35973 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.57□□□□□ -0.24
Per1O35973 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Per1O35973 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.56□□□□□ -0.24
Per1O35973 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.56□□□□□ -0.24
Per1O35973 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Per1O35973 Gm14130-201ENSMUST00000118417 987 ntBASIC13.56□□□□□ -0.24
Per1O35973 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.56□□□□□ -0.24
Per1O35973 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.56□□□□□ -0.24
Per1O35973 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.56□□□□□ -0.24
Per1O35973 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.56□□□□□ -0.24
Per1O35973 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.56□□□□□ -0.24
Per1O35973 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.56□□□□□ -0.24
Per1O35973 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.56□□□□□ -0.24
Per1O35973 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Per1O35973 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Per1O35973 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Per1O35973 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Per1O35973 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Per1O35973 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Gm13296-201ENSMUST00000117854 997 ntBASIC13.55□□□□□ -0.24
Per1O35973 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Gm18711-201ENSMUST00000199341 750 ntBASIC13.55□□□□□ -0.24
Per1O35973 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.55□□□□□ -0.24
Per1O35973 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.55□□□□□ -0.24
Per1O35973 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.55□□□□□ -0.24
Per1O35973 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Per1O35973 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms