Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm24196-201ENSMUST00000179161 110 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm5035-201ENSMUST00000215581 927 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Gm28043E0CXC2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Gm37444-201ENSMUST00000193605 439 ntBASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm28043E0CXC2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Gm28043E0CXC2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms