Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm12266-201ENSMUST00000120311 962 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Mir339-201ENSMUST00000083659 96 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm11340-201ENSMUST00000119226 412 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Gm10076-201ENSMUST00000073238 384 ntBASIC10.57□□□□□ -0.72
Col6a4A2AX52 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a4A2AX52 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Matn2-206ENSMUST00000228570 2798 ntBASIC10.56□□□□□ -0.72
Col6a4A2AX52 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.56□□□□□ -0.72
Col6a4A2AX52 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a4A2AX52 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Col6a4A2AX52 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms