Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm37986-201ENSMUST00000193285 383 ntBASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.86□□□□□ -0.19
Scn3aA2ASI5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.86□□□□□ -0.19
Scn3aA2ASI5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm21811-201ENSMUST00000096485 930 ntBASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Gm4034-201ENSMUST00000187674 480 ntBASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn3aA2ASI5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm11941-201ENSMUST00000119904 610 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm17931-201ENSMUST00000208132 634 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm9797-202ENSMUST00000218003 294 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Scn3aA2ASI5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms