Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.07□□□□□ -0.32
Scn1aA2APX8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Gm7003-201ENSMUST00000195089 312 ntBASIC13.07□□□□□ -0.32
Scn1aA2APX8 Gm5363-201ENSMUST00000211927 938 ntBASIC13.07□□□□□ -0.32
Scn1aA2APX8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.07□□□□□ -0.32
Scn1aA2APX8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1aA2APX8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.06□□□□□ -0.32
Scn1aA2APX8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.06□□□□□ -0.32
Scn1aA2APX8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.06□□□□□ -0.32
Scn1aA2APX8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn1aA2APX8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm12217-201ENSMUST00000118858 696 ntBASIC13.05□□□□□ -0.32
Scn1aA2APX8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm18827-201ENSMUST00000188341 790 ntBASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm5455-201ENSMUST00000058710 715 ntBASIC13.05□□□□□ -0.32
Scn1aA2APX8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.05□□□□□ -0.32
Scn1aA2APX8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Scn1aA2APX8 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms