Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm15806-201ENSMUST00000120696 955 ntBASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm4768-201ENSMUST00000206199 686 ntBASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc194A0A140LIT1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Gm22331-201ENSMUST00000158066 136 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Gm19163-201ENSMUST00000223313 780 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Gm10012-201ENSMUST00000078252 192 ntBASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc194A0A140LIT1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Gm8652-201ENSMUST00000181363 964 ntBASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Gm29705-201ENSMUST00000212598 474 ntBASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc194A0A140LIT1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms