Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm6736-201ENSMUST00000166583 948 ntBASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm43703-201ENSMUST00000200523 763 ntBASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm5161-201ENSMUST00000075243 853 ntBASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm11594-201ENSMUST00000122313 162 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm27390-201ENSMUST00000184516 176 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm17795-201ENSMUST00000214505 757 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms