Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Mir7654-201ENSMUST00000185082 70 ntBASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm27390-201ENSMUST00000184516 176 ntBASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav6n-6A0A075B6B2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms