Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav18A0A075B656 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.28□□□□□ -0.76
Trav18A0A075B656 Gm37497-201ENSMUST00000195830 798 ntBASIC10.28□□□□□ -0.76
Trav18A0A075B656 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.28□□□□□ -0.76
Trav18A0A075B656 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Trav18A0A075B656 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.28□□□□□ -0.76
Trav18A0A075B656 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.28□□□□□ -0.76
Trav18A0A075B656 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.28□□□□□ -0.76
Trav18A0A075B656 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav18A0A075B656 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.27□□□□□ -0.76
Trav18A0A075B656 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav18A0A075B656 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm11637-201ENSMUST00000120601 592 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm14760-201ENSMUST00000121831 999 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm2231-201ENSMUST00000125661 612 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm5356-201ENSMUST00000093326 615 ntBASIC10.27□□□□□ -0.77
Trav18A0A075B656 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav18A0A075B656 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms