Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm12502-201ENSMUST00000120197 444 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cldn9Q9Z0S7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms