Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AmfrQ9R049 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AmfrQ9R049 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AmfrQ9R049 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm16379-201ENSMUST00000161469 348 ntBASIC14.05□□□□□ -0.16
AmfrQ9R049 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm8762-201ENSMUST00000193486 339 ntBASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm32025-201ENSMUST00000217960 307 ntBASIC14.05□□□□□ -0.16
AmfrQ9R049 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.05□□□□□ -0.16
AmfrQ9R049 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AmfrQ9R049 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AmfrQ9R049 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Gm22121-201ENSMUST00000175148 54 ntBASIC14.04□□□□□ -0.16
AmfrQ9R049 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.04□□□□□ -0.16
AmfrQ9R049 Gm38002-201ENSMUST00000193255 180 ntBASIC14.04□□□□□ -0.16
AmfrQ9R049 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AmfrQ9R049 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AmfrQ9R049 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm12291-201ENSMUST00000121627 311 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm26185-201ENSMUST00000157692 266 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm37008-201ENSMUST00000195712 319 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm43118-201ENSMUST00000199149 775 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
AmfrQ9R049 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AmfrQ9R049 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.03□□□□□ -0.16
AmfrQ9R049 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms