Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf4Q9QZS2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm13616-201ENSMUST00000120600 222 ntBASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm20949-201ENSMUST00000206478 952 ntBASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf4Q9QZS2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gm44344-201ENSMUST00000200287 129 ntBASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf4Q9QZS2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf4Q9QZS2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms