Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Dupd1-202ENSMUST00000224735 548 ntBASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim44Q9QXA7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm43622-201ENSMUST00000200140 2019 ntBASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm24420-201ENSMUST00000176676 59 ntBASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.46□□□□□ -0.09
Trim44Q9QXA7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Gm18262-201ENSMUST00000222560 1946 ntBASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.46□□□□□ -0.09
Trim44Q9QXA7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim44Q9QXA7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trim44Q9QXA7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim44Q9QXA7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim44Q9QXA7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm6912-201ENSMUST00000117218 544 ntBASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm9719-201ENSMUST00000162765 543 ntBASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm43125-201ENSMUST00000201724 730 ntBASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim44Q9QXA7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Gm5566-201ENSMUST00000116118 459 ntBASIC14.44□□□□□ -0.1
Trim44Q9QXA7 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms