Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm6621-201ENSMUST00000193251 772 ntBASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm44958-201ENSMUST00000203734 736 ntBASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Gm6334-201ENSMUST00000207083 228 ntBASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3aQ9JKX8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm11222-201ENSMUST00000119005 738 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm2991-201ENSMUST00000173338 480 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm28882-201ENSMUST00000185504 314 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm45865-201ENSMUST00000211815 945 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms