Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm7063-201ENSMUST00000186840 981 ntBASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Gm26035-201ENSMUST00000083065 308 ntBASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lima1Q9ERG0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.4□□□□□ -0.43
Lima1Q9ERG0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lima1Q9ERG0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gm13813-201ENSMUST00000120998 787 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gm11978-201ENSMUST00000122315 466 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gm6745-201ENSMUST00000199216 526 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lima1Q9ERG0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gm11918-201ENSMUST00000121660 179 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gm7287-201ENSMUST00000205267 602 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lima1Q9ERG0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lima1Q9ERG0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lima1Q9ERG0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms