Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgn3Q9DCB1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gm13453-201ENSMUST00000118708 357 ntBASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gm13616-201ENSMUST00000120600 222 ntBASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgn3Q9DCB1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgn3Q9DCB1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgn3Q9DCB1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgn3Q9DCB1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgn3Q9DCB1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.77□□□□□ -0.53
Hmgn3Q9DCB1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.77□□□□□ -0.53
Hmgn3Q9DCB1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgn3Q9DCB1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms