Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.11□□□□□ -0.31
Chmp2aQ9DB34 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm13492-201ENSMUST00000119772 665 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm27516-201ENSMUST00000184237 98 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm24526-201ENSMUST00000082921 158 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp2aQ9DB34 Daam2-202ENSMUST00000224595 1926 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm38158-201ENSMUST00000194617 339 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm42627-201ENSMUST00000197347 224 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm43118-201ENSMUST00000199149 775 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms