Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm2546-201ENSMUST00000182630 991 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm5950-201ENSMUST00000213337 772 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm22058-201ENSMUST00000083393 310 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.17□□□□□ -0.14
Smco2Q9DA21 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smco2Q9DA21 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.16□□□□□ -0.14
Smco2Q9DA21 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.16□□□□□ -0.14
Smco2Q9DA21 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.16□□□□□ -0.14
Smco2Q9DA21 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.16□□□□□ -0.14
Smco2Q9DA21 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Mir339-201ENSMUST00000083659 96 ntBASIC14.16□□□□□ -0.14
Smco2Q9DA21 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smco2Q9DA21 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm11531-201ENSMUST00000117614 555 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm31256-201ENSMUST00000194705 506 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Smco2Q9DA21 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.15□□□□□ -0.14
Smco2Q9DA21 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco2Q9DA21 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms