Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Gm5161-201ENSMUST00000075243 853 ntBASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.69□□□□□ -0.38
Sf3a3Q9D554 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.68□□□□□ -0.38
Sf3a3Q9D554 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Gm24447-201ENSMUST00000083977 338 ntBASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3a3Q9D554 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms