Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Gm15824-201ENSMUST00000119516 955 ntBASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc3Q9CWU5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm18187-201ENSMUST00000196476 984 ntBASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc3Q9CWU5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms