Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc3Q9CW03 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.75□□□□□ -0.05
Smc3Q9CW03 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Mir1894-201ENSMUST00000122802 81 ntBASIC14.75□□□□□ -0.05
Smc3Q9CW03 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Gm16296-201ENSMUST00000159905 325 ntBASIC14.75□□□□□ -0.05
Smc3Q9CW03 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.75□□□□□ -0.05
Smc3Q9CW03 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc3Q9CW03 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm15703-201ENSMUST00000120250 880 ntBASIC14.74□□□□□ -0.05
Smc3Q9CW03 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm24196-201ENSMUST00000179161 110 ntBASIC14.74□□□□□ -0.05
Smc3Q9CW03 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.74□□□□□ -0.05
Smc3Q9CW03 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.74□□□□□ -0.05
Smc3Q9CW03 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.74□□□□□ -0.05
Smc3Q9CW03 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.74□□□□□ -0.05
Smc3Q9CW03 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smc3Q9CW03 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.73□□□□□ -0.05
Smc3Q9CW03 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Cog3-203ENSMUST00000227473 4197 ntBASIC14.73□□□□□ -0.05
Smc3Q9CW03 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.73□□□□□ -0.05
Smc3Q9CW03 Gm8652-201ENSMUST00000181363 964 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms