Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chchd1Q9CQA6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.41□□□□□ -0.9
Chchd1Q9CQA6 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chchd1Q9CQA6 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chchd1Q9CQA6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Chchd1Q9CQA6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Chchd1Q9CQA6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Rgr-203ENSMUST00000225070 4704 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm15565-201ENSMUST00000118890 427 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm13813-201ENSMUST00000120998 787 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chchd1Q9CQA6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 191.1 ms