Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.31□□□□□ -0.44
Trim16Q99PP9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim16Q99PP9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.3□□□□□ -0.44
Trim16Q99PP9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.3□□□□□ -0.44
Trim16Q99PP9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.3□□□□□ -0.44
Trim16Q99PP9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.3□□□□□ -0.44
Trim16Q99PP9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.3□□□□□ -0.44
Trim16Q99PP9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim16Q99PP9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.29□□□□□ -0.44
Trim16Q99PP9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.29□□□□□ -0.44
Trim16Q99PP9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.29□□□□□ -0.44
Trim16Q99PP9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.29□□□□□ -0.44
Trim16Q99PP9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.29□□□□□ -0.44
Trim16Q99PP9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim16Q99PP9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms