Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm8099-201ENSMUST00000200510 742 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm32025-201ENSMUST00000217960 307 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim33Q99PP7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Matn2-203ENSMUST00000226766 3252 ntBASIC12.52□□□□□ -0.4
Trim33Q99PP7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim33Q99PP7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.52□□□□□ -0.41
Trim33Q99PP7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Gm37319-201ENSMUST00000193500 636 ntBASIC12.52□□□□□ -0.41
Trim33Q99PP7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.52□□□□□ -0.41
Trim33Q99PP7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.52□□□□□ -0.41
Trim33Q99PP7 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.52□□□□□ -0.41
Trim33Q99PP7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms