Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Mir339-201ENSMUST00000083659 96 ntBASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Map1b-203ENSMUST00000223725 2669 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm12490-201ENSMUST00000120255 560 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm12291-201ENSMUST00000121627 311 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm12091-201ENSMUST00000146791 830 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm2495-201ENSMUST00000191160 466 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm8515-201ENSMUST00000194852 576 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm6180-201ENSMUST00000065243 498 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim8Q99PJ2 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms