Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm38002-201ENSMUST00000193255 180 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm18054-201ENSMUST00000207539 555 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.25□□□□□ -0.45
Msh4Q99MT2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Msh4Q99MT2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm25261-201ENSMUST00000157416 134 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm17208-201ENSMUST00000168388 535 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm6007-201ENSMUST00000208170 823 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm9823-201ENSMUST00000051212 327 ntBASIC12.24□□□□□ -0.45
Msh4Q99MT2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Msh4Q99MT2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm16379-201ENSMUST00000161469 348 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm8762-201ENSMUST00000193486 339 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm6013-201ENSMUST00000212264 699 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms