Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Gm5781-201ENSMUST00000219792 443 ntBASIC13.5□□□□□ -0.25
Tlr3Q99MB1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tlr3Q99MB1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm15236-201ENSMUST00000117309 379 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm16570-201ENSMUST00000161951 436 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Mir3102-201ENSMUST00000175555 104 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm9630-201ENSMUST00000178304 885 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm4857-201ENSMUST00000192718 785 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Rubie-203ENSMUST00000227803 2430 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Daam2-202ENSMUST00000224595 1926 ntBASIC13.49□□□□□ -0.25
Tlr3Q99MB1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm24231-201ENSMUST00000104315 133 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm11793-201ENSMUST00000120433 981 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Rmrp-201ENSMUST00000157463 271 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm18827-201ENSMUST00000188341 790 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm22058-201ENSMUST00000083393 310 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tlr3Q99MB1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tlr3Q99MB1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tlr3Q99MB1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tlr3Q99MB1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tlr3Q99MB1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tlr3Q99MB1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tlr3Q99MB1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms