Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Mir7221-201ENSMUST00000184009 72 ntBASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gm1821-202ENSMUST00000227415 750 ntBASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Gm13035-201ENSMUST00000117496 342 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Gm14716-201ENSMUST00000120138 718 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-1Q99MA9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm14460-201ENSMUST00000121511 639 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms