Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm13665-201ENSMUST00000120830 528 ntBASIC11.04□□□□□ -0.64
Scrt1Q99M85 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.04□□□□□ -0.64
Scrt1Q99M85 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm45224-201ENSMUST00000208203 414 ntBASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.04□□□□□ -0.64
Scrt1Q99M85 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.04□□□□□ -0.64
Scrt1Q99M85 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scrt1Q99M85 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Snord83b-201ENSMUST00000104546 94 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm13611-201ENSMUST00000118269 318 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm15547-201ENSMUST00000122152 333 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm23699-201ENSMUST00000158835 135 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm7593-201ENSMUST00000187246 644 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms