Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm7399-201ENSMUST00000032395 858 ntBASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Gm43118-201ENSMUST00000199149 775 ntBASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Gm26035-201ENSMUST00000083065 308 ntBASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdha3Q91Y16 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdha3Q91Y16 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdha3Q91Y16 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm11793-201ENSMUST00000120433 981 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm5904-201ENSMUST00000210286 865 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Gm24526-201ENSMUST00000082921 158 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdha3Q91Y16 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdha3Q91Y16 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms