Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm13369-201ENSMUST00000119442 987 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm9002-201ENSMUST00000178437 499 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm8652-201ENSMUST00000181363 964 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm37497-201ENSMUST00000195830 798 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm9794-201ENSMUST00000202370 423 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb4Q91XZ6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Gm12203-201ENSMUST00000118235 598 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Gm12209-201ENSMUST00000120089 596 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Mir339-201ENSMUST00000083659 96 ntBASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb4Q91XZ6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm12490-201ENSMUST00000120255 560 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm15806-201ENSMUST00000120696 955 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm16479-201ENSMUST00000121706 932 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm2231-201ENSMUST00000125661 612 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms