Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga3Q91XY5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm26185-201ENSMUST00000157692 266 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm27331-201ENSMUST00000183705 60 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm7561-201ENSMUST00000211203 886 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm6091-201ENSMUST00000098307 165 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga3Q91XY5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm4984-201ENSMUST00000115987 360 ntBASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm12291-201ENSMUST00000121627 311 ntBASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm16479-201ENSMUST00000121706 932 ntBASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm4271-201ENSMUST00000174444 973 ntBASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga3Q91XY5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms