Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm23699-201ENSMUST00000158835 135 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm5523-201ENSMUST00000180415 997 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm28071-201ENSMUST00000190355 478 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trex1Q91XB0 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.34□□□□□ -0.11
Trex1Q91XB0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trex1Q91XB0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.33□□□□□ -0.11
Trex1Q91XB0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trex1Q91XB0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trex1Q91XB0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm14760-201ENSMUST00000121831 999 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.33□□□□□ -0.12
Trex1Q91XB0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trex1Q91XB0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.32□□□□□ -0.12
Trex1Q91XB0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.32□□□□□ -0.12
Trex1Q91XB0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trex1Q91XB0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trex1Q91XB0 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.32□□□□□ -0.12
Trex1Q91XB0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trex1Q91XB0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms