Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3d19Q91X43 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3d19Q91X43 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3d19Q91X43 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3d19Q91X43 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.08□□□□□ -0.31
Sh3d19Q91X43 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm12015-201ENSMUST00000117065 843 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3d19Q91X43 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.07□□□□□ -0.32
Sh3d19Q91X43 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3d19Q91X43 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms